Chapter 10: Contributions

(This thesis chapter will show my contributions for each chapter and list all the other contributors)

My contributions

Contributor affiliations

Sanne Abeln https://orcid.org/0000-0002-2779-7174
Department of Computer Science, VU Amsterdam, Amsterdam, The Netherlands
Peter Amstutz https://orcid.org/0000-0003-3566-7705
Curii Corporation, Sommerville, MA, USA
Pau Andrio https://orcid.org/0000-0003-2116-3880
The Spanish National Bioinformatics Institute (INB), Barcelona Supercomputing Center (BSC), Barcelona, Spain
Haris Antonatos
SciFY, Athens, Greece
Finn Bacall https://orcid.org/0000-0002-0048-3300
Department of Computer Science, The University of Manchester, Manchester, UK
Genís Bayarri https://orcid.org/0000-0003-0513-0288
Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain
Paul Brack https://orcid.org/0000-0002-5432-2748
Department of Computer Science, The University of Manchester, Manchester, UK
Salvador Capella-Gutierrez https://orcid.org/0000-0002-0309-604X
Life Sciences Department. Barcelona Supercomputing Center (BSC), Barcelona, Spain
Eoghan Ó Carragáin https://orcid.org/0000-0001-8131-2150
University College Cork, Ireland
John Chilton https://orcid.org/0000-0002-6794-0756⁴⁵,
Department of Biochemistry and Molecular Biology, Pennsylvania State University, PA, USA
Galaxy Project
Frederik Coppens https://orcid.org/0000-0001-6565-5145
Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium
Mercè Crosas https://orcid.org/0000-0003-1304-1939
Institute for Quantitative Social Science, Harvard University, Cambridge, MA, USA
Secretària de Govern Obert, Catalunya, Barcelona, ES
Peter Crowther https://orcid.org/0000-0002-2222-9418
Melandra Limited, Stockport, UK
Michael R. Crusoe https://orcid.org/0000-0002-2961-9670
Department of Computer Science, VU Amsterdam, Amsterdam, The Netherlands
Common Workflow Language project, Software Freedom Conservancy, Brooklyn, NY, USA
Mathias Dillen https://orcid.org/0000-0002-3973-1252
Meise Botanic Garden, Meise, Belgium
Bert Droesbeke https://orcid.org/0000-0003-0522-5674
Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
VIB Center for Plant Systems Biology, Ghent, Belgium
Michel Dumontier https://orcid.org/0000-0003-4727-9435
Institute of Data Science, Maastricht University, Maastricht, The Netherlands
Ignacio Eguinoa https://orcid.org/0000-0002-6190-122X
Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
VIB-UGent Center for Plant Systems Biology, Ghent, Belgium
Vincent Emonet https://orcid.org/0000-0002-1501-1082
Institute of Data Science, Maastricht University, Maastricht, The Netherlands
Philip Ewels https://orcid.org/0000-0003-4101-2502
Science for Life Laboratory (SciLifeLab), Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden
José Mª Fernández https://orcid.org/0000-0002-4806-5140
Barcelona Supercomputing Center, Barcelona, Spain
Daniel Garijo https://orcid.org/0000-0003-0454-7145
Ontology Engineering Group, Universidad Politécnica de Madrid, Madrid, Spain
Bogdan Gavrilović https://orcid.org/0000-0003-1550-1716
Seven Bridges, Charlestown, MA, USA
Carole Goble https://orcid.org/0000-0003-1219-2137
Department of Computer Science, The University of Manchester, Manchester, UK
Quentin Groom https://orcid.org/0000-0002-0596-5376
Meise Botanic Garden, Meise, Belgium
Paul Groth https://orcid.org/0000-0003-0183-6910
Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands
Björn Grüning https://orcid.org/0000-0002-3079-6586
Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, Freiburg, Germany
Alex Hardisty https://orcid.org/0000-0002-0767-4310
School of Computer Science and Informatics, Cardiff University, Cardiff, UK
Adam Hospital https://orcid.org/0000-0002-8291-8071
Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain
Alexandru Iosup https://orcid.org/0000-0001-8030-9398¹,
Department of Computer Science, VU Amsterdam, Amsterdam, The Netherlands
Leyla Jael Castro https://orcid.org/0000-0003-3986-0510
ZB MED Information Centre for Life Sciences, Cologne, Germany
Tobias Kuhn https://orcid.org/0000-0002-1267-0234
Department of Computer Science, VU Amsterdam, Amsterdam, The Netherlands
Simone Leo https://orcid.org/0000-0001-8271-5429
Center for Advanced Studies, Research, and Development in Sardinia (CRS4), Pula (CA), Italy
Laurence Livermore https://orcid.org/0000-0002-7341-1842
The Natural History Museum, London, UK
Robin Long https://orcid.org/0000-0003-2249-645X
Lancaster University, Lancaster, UK
Research IT, The University of Manchester, Manchester, UK
Douglas Lowe https://orcid.org/0000-0002-1248-3594
Research IT, The University of Manchester, Manchester, UK
Hervé Ménager https://orcid.org/0000-0002-7552-1009
Hub de Bioinformatique et Biostatistique, Département Biologie Computationnelle, Institut Pasteur, Paris, France
Ania Niewielska https://orcid.org/0000-0003-0989-3389
European Bioinformatics Institute (EMBL-EBI), Cambridge, UK
Stuart Owen https://orcid.org/0000-0003-2130-0865
Department of Computer Science, The University of Manchester, Manchester, UK
Luca Pireddu https://orcid.org/0000-0002-4663-5613
Center for Advanced Studies, Research and Development in Sardinia (CRS4), Pula, Italy
Marc Portier https://orcid.org/0000-0002-9648-6484
Vlaams Instituut voor de Zee (VLIZ), Oostende, Belgium
Laura Rodriguez-Navas https://orcid.org/0000-0003-4929-1219
Life Sciences Department. Barcelona Supercomputing Center (BSC), Barcelona, Spain
Marco La Rosa https://orcid.org/0000-0001-5383-6993
PARADISEC, Melbourne, Australia
Ben Scott https://orcid.org/0000-0002-5590-7174
The Natural History Museum, London, UK
Peter Sefton https://orcid.org/0000-0002-3545-944X
Faculty of Science, University Technology Sydney, Australia
The University of Queensland School of Languages and Cultures, The University of Queensland, Brisbane, Queensland, Australia
Beatriz Serrano-Solano https://orcid.org/0000-0002-5862-6132
Bioinformatics Group, Albert-Ludwigs-University Freiburg, Freiburg, Germany
Stian Soiland-Reyes https://orcid.org/0000-0001-9842-9718
Department of Computer Science, The University of Manchester, Manchester, UK
Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands
Ruben Taelman https://orcid.org/0000-0001-5118-256X
IDLab, Ghent University, Ghent, Belgium
Nebojša Tijanić https://orcid.org/0000-0001-8316-4067
Seven Bridges, Charlestown, MA, USA
Ana Trisovic https://orcid.org/0000-0003-1991-0533
Institute for Quantitative Social Science, Harvard University, Cambridge, MA, USA
Alan R Williams https://orcid.org/0000-0003-3156-2105
Department of Computer Science, The University of Manchester, Manchester, UK
Oliver Woolland https://orcid.org/0000-0002-4565-9760
Research IT, The University of Manchester, Manchester, UK